PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_5AL_69A969FF4.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 164aa    MW: 18744.6 Da    PI: 6.6682
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_5AL_69A969FF4.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY57.62.5e-183378245
                           --SS-EEEEEEE--TT-SS-EEEEEE-ST..T---EEEEEE-SSST CS
                   WRKY  2 dDgynWrKYGqKevkgsefprsYYrCtsa..gCpvkkkversaedp 45
                            Dg++WrKYGqK+++g +++rsYYrCt++  +C+++k v+++++d+
  Traes_5AL_69A969FF4.1 33 YDGHQWRKYGQKNINGRQHARSYYRCTYTerNCSATKTVQQQDQDG 78
                           59**************************999***********9997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.9E-2121106IPR003657WRKY domain
SuperFamilySSF1182905.1E-1826106IPR003657WRKY domain
SMARTSM007743.7E-2332107IPR003657WRKY domain
PfamPF031062.3E-2334106IPR003657WRKY domain
PROSITE profilePS5081116.4553494IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    Send to blast
MDEQAKPSCI VGRKRRRNDG KRSRSLVTNV PHYDGHQWRK YGQKNINGRQ HARSYYRCTY  60
TERNCSATKT VQQQDQDGGG SIYSADAGED QGAKYTVVYY GDHTCKAGDN ISNNIIDHLP  120
NLVDIDLRRG ETERVTAEIS EFDMELDVPA LLEVFNNSQL NWEI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11216RKRRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU6696611e-104EU669661.1 Triticum aestivum WRKY31 gene, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010239551.22e-62PREDICTED: probable WRKY transcription factor 66
TrEMBLW5EXY21e-122W5EXY2_WHEAT; Uncharacterized protein
STRINGBRADI4G44350.11e-61(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP32583079
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66550.22e-14WRKY DNA-binding protein 67
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]